HLA-A66

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HLA-A66
(MHC Class I, A cell surface antigen)
File:Illustration HLA-A.png
HLA-A66
About
Proteintransmembrane receptor/ligand
Structureαβ heterodimer
SubunitsHLA-A*66--, β2-microglobulin
Older namesA10
Subtypes
Subtype
allele
Available structures
A66.1 *6601
A66.2 *6602
{{{cNick3}}} *66{{{cAllele3}}}
{{{cNick4}}} *66{{{cAllele4}}}
Rare alleles
Subtype
allele
Available structures
A66.3 *6603
{{{rnick2}}} *66{{{rallele2}}}
{{{rnick3}}} *66{{{rallele3}}}
Alleles link-out to IMGT/HLA database at EBI

HLA-A66 (A66) is a human leukocyte antigen serotype within HLA-A serotype group. The serotype is determined by the antibody recognition of α66 subset of HLA-A α-chains. For A66, the alpha "A" chain are encoded by the HLA-A*66 allele group and the β-chain are encoded by B2M locus.[1] A66 and A*66 are almost synonymous in meaning. A66 is a split antigen of the broad antigen serotype A10. A66 is a sister serotype of A25A26A34, and A43.

A66 is more common in Africa and Southwest Europe. A66 (A*6601) is believed to have been formed by a single gene conversion between another HLA-A and the A*2601 allele.[2].

Serotype

A66 recognition of some HLA A*66 gene products[3]
A*66 A66 A10 A26 A34 Sample
allele % % % % size (N)
*6601 20 10 61 8 799
*6602 38 10 4 27 205
*6603 32 7 7 18 28

A66 serotyping is poor. A*6601 is also sometimes recognized by A25, and A*6602 is often recognized by A74.

A*6601 Frequencies

HLA A*6601 frequencies
freq
ref. Population (%)
[4] Cameroon Sawa 7.7
[4] Kenya Luo 6.8
[4] Cameroon Sawa 7.7
[4] Cameroon Bakola Pygmy 5.8
[4] Cameroon Baka Pygmy 5.0
[4] Kenya Nandi 5.0
[4] Zimbabwe Harare Shona 0.2
[4] Cameroon Baka Pygmy 5.0
[4] Cameroon Beti 4.6
[4] Cameroon Bamileke 4.5
[4] India West Bhils 4.0
[4] Zimbabwe Harere Shona 3.8
[4] Uganda Kampala 3.8
[4] India Mumbai Marathas 2.5
[4] Cape Verde Northwestern 2.5
[4] Czech republic 2.4
[4] Morocco Nador Metalsa 2.1
[4] Central Portugal 2.0
[4] India West Parsis 2.0
[4] South African Natal Zulu 2.0
[4] Kenya 1.7
[4] Tunisia Tunis 1.7
[4] Guinea Bissau 1.5
[4] Georgia Tbilisi 1.4
[4] Zambia Lusaka 1.2
[4] Italy Bergamo 1.1
[4] Pakistan Karachi Parsi 1.1
[4] Oman 0.8
[4] Sudanese 0.8
[4] Belgium 0.5
[4] Southeast France 0.4
[4] Mongolia Buriat 0.4
[4] Wales 0.2
HLA A*6602 frequencies
freq
ref. Population (%)
[4] South African Natal Zulu 1.5
[4] Cameroon Yaounde 1.1
[4] Cameroon Bamileke 0.6
[4] Senegal Niokholo Mandenka 0.5
[4] Kenya Nandi 0.4
[4] Zimbabwe Harare Shona 0.2
[4] Wales 0.03
HLA A*6603 frequencies
freq
ref. Population (%)
[4] Cameroon Pygmy Baka 10.0
[4] Cameroon Bakola Pygmy 9.0
[4] Cameroon Sawa 7.7
[4] CAR Mbenzele Pygmy 2.8
[4] Zimbabwe Harare Shona 0.2

References

  1. Arce-Gomez B, Jones EA, Barnstable CJ, Solomon E, Bodmer WF (February 1978). "The genetic control of HLA-A and B antigens in somatic cell hybrids: requirement for beta2 microglobulin". Tissue Antigens. 11 (2): 96–112. doi:10.1111/j.1399-0039.1978.tb01233.x. PMID 77067.
  2. Madrigal JA, Hildebrand WH, Belich MP, et al. (1993). "Structural diversity in the HLA-A10 family of alleles: correlations with serology". Tissue Antigens. 41 (2): 72–80. doi:10.1111/j.1399-0039.1993.tb01982.x. PMID 8475492.
  3. Allele Query Form IMGT/HLA - European Bioinformatics Institute
  4. 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 4.12 4.13 4.14 4.15 4.16 4.17 4.18 4.19 4.20 4.21 4.22 4.23 4.24 4.25 4.26 4.27 4.28 4.29 4.30 4.31 4.32 4.33 4.34 4.35 4.36 4.37 4.38 4.39 4.40 4.41 4.42 4.43 4.44 Middleton D, Menchaca L, Rood H, Komerofsky R (2003). "New allele frequency database". Tissue Antigens. 61 (5): 403–7. doi:10.1034/j.1399-0039.2003.00062.x. PMID 12753660.